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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc002277.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
ERF |
Protein Properties |
Length: 384aa MW: 42164.3 Da PI: 4.5535 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc002277.1_g00004.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 119 | 168 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp+ + r++lg+f taeeAa+a++ +++++g
Itr_sc002277.1_g00004.1 119 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTFNTAEEAARAYDVEARRIRG 168
69*******.**********75....44************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0070483 | Biological Process | detection of hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0005886 | Cellular Component | plasma membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MCGGAIISDI IPPSRSSRRL TADLLWGPAD LSSNNGGKKK NRNSNSSGSF YSRPSRSGIA 60 DIDNDFEADF QHFKDYSDEE VEVKPFDFSA SKQPGFSSGS NSDLTKDADK SSKRKRKNQY 120 RGIRQRPWGK WAAEIRDPVK GVRVWLGTFN TAEEAARAYD VEARRIRGKK AKVNFPDEAP 180 ISGPGCNVKA NARIQKESPQ PDMSFTNILD SVYYEPVNSL DEKPLTKQNE IIDAYAAPGD 240 MSHTSYAPSD TANLFFNSEE GSNSFGCSEL GWGDLSSRTP EISSVLSAAV EADEALFAEE 300 ANQAKKLKSS SENLVASDGN TLNKLSDELS AFEAEMKFFQ IPYLEGNWEA SVDTFLNGDA 360 TQDGGSAMDL WSFDYAPTLM GNEF
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