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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc002061.1_g00007.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
bHLH |
Protein Properties |
Length: 391aa MW: 44022.3 Da PI: 6.5125 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc002061.1_g00007.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 32.2 | 2e-10 | 190 | 238 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y+ksLq
Itr_sc002061.1_g00007.1 190 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVKSLQ 238
58**************************....999*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MGTDEDNGEM GLHLFQCGSD WDPLVSMDQS LHYPVLLDDD QPINRNPHLL HYPSNSYLAD 60 MLPKITAFEN EGFSEMISSF GASDFHPNYV AAIQNSQEDC WNLEEVRKRK SSEPHSPSHK 120 NVERGLLKNT AVDNSECSKQ EDEKKQKPEN SSSLMAKLAG KQVKNDDSSN GKPRNENYVH 180 VRAKRGQATN SHSLAERVRR ERISERMRLL QELVPGCNKI TGKAVMLDEI INYVKSLQQQ 240 VETITFQFLS MKLATVNPEI NLDIQQAMTK EIFATQASNV PLRGFIHGIS SSQTFPGFQQ 300 GDFANIPNTI PPIRPSPQNL LSNDLHSILP TTLDSSSSMS IMDPNIYQGS KSWSERQQVL 360 HSSINAFLQT KIQTQLDCRI SVSDKKSSNY R
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP257466 | 1e-52 | KP257466.1 Salvia miltiorrhiza clone 33 basic helix-loop-helix transcription factor mRNA, complete cds. |