 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc002000.1_g00008.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
GRAS |
| Protein Properties |
Length: 167aa MW: 18680.5 Da PI: 7.055 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc002000.1_g00008.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 168.8 | 4.3e-52 | 2 | 166 | 18 | 195 |
GRAS 18 elaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
+la+al++++ la++++ +m+++a+yf+eAL +r++r l ps+ + + + + + f+e +P lkf+++t+ Il
Itr_sc002000.1_g00008.1 2 KLAEALVKQIGFLAASQAGAMRKVATYFAEALTQRIYR--------LYPSNHN--DFAFSGLLQMHFYESCPHLKFAYFTT---IL 74
689***********************************........4444444..56667667777*************95...** PP
GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
ea++++++vH iDf+++qG+QWpaLlqaLa Rp+gpp++R+Tg+++p++++++ l+e+g++La++Ae+++v+fef+ +va++l+dl
Itr_sc002000.1_g00008.1 75 EAFANKNCVHAIDFSMKQGMQWPALLQALALRPGGPPNFRLTGISPPSNDNTDHLQEVGWKLAQLAETINVEFEFRGFVANSLADL 160
************************************************************************************** PP
GRAS 190 eleeLr 195
+ ++++
Itr_sc002000.1_g00008.1 161 DASMFN 166
*99976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MKLAEALVKQ IGFLAASQAG AMRKVATYFA EALTQRIYRL YPSNHNDFAF SGLLQMHFYE 60
SCPHLKFAYF TTILEAFANK NCVHAIDFSM KQGMQWPALL QALALRPGGP PNFRLTGISP 120
PSNDNTDHLQ EVGWKLAQLA ETINVEFEFR GFVANSLADL DASMFNI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
