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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc001923.1_g00011.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
LBD |
| Protein Properties |
Length: 230aa MW: 25166.4 Da PI: 5.6486 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001923.1_g00011.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 114.5 | 6.9e-36 | 38 | 139 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqp..kkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84
+C aCk+lrrkC ++C++apyf +++ +fa+vhk+FG+sn +k+l ++p ++r++a+ +l yeA+ar++dP+yG+v++il+l+
Itr_sc001923.1_g00011.1 38 PCGACKFLRRKCIPSCIFAPYFEYSDQgvTRFAAVHKVFGTSNASKILLRTPANRRHCAAITLSYEAQARLSDPIYGCVSTILALK 123
7*********************8865434********************************************************* PP
DUF260 85 qqleqlkaelallkee 100
qq+++l+ae+a++k+e
Itr_sc001923.1_g00011.1 124 QQVASLEAEIAMVKTE 139
***********99987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 230 aa
Download sequence Send
to blast |
MDTYSHGDGA SSDIAPKHMS TEKQVASESV GVVVIKAPCG ACKFLRRKCI PSCIFAPYFE 60
YSDQGVTRFA AVHKVFGTSN ASKILLRTPA NRRHCAAITL SYEAQARLSD PIYGCVSTIL 120
ALKQQVASLE AEIAMVKTEI MNSTFAVENG LQTSQQQEEP TYFNTSSTAA LNKDVLNISN 180
FSSNFNLIGE TIYADSQCFD PLVQLSCPFP AGGNEEQSYY PIAFTNQMFY
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