PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc001866.1_g00009.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family EIL
Protein Properties Length: 471aa    MW: 53456.1 Da    PI: 4.6481
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc001866.1_g00009.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3367.52.3e-112363672353
                              XXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgk 82 
                              +lkkrm kdq+ +++lk+++    + ke+       +++ ++k  e++rrkk++r+QD++LkYM+k+mevc+ qGfvYgi+pe+g+
  Itr_sc001866.1_g00009.1  36 DLKKRMRKDQIHMQKLKDKRAAAAAGKEEIlreddEDESATEKQLEASRRKKTARSQDAVLKYMVKIMEVCKGQGFVYGIVPENGN 121
                              9*********************99999998555444444555999***************************************** PP

                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
                     EIN3  83 pvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                              pv g+sdsLr+WWk+kv+f +n+p ai++y +k + l  e+     +ss    l++lqDTtlgSL+salm hc ppqr+fplekg+
  Itr_sc001866.1_g00009.1 122 PVIGSSDSLREWWKDKVKFVKNAPEAIAEYLPKLVGLV-EDP----NSSVIYLLQDLQDTTLGSLMSALMPHCLPPQRKFPLEKGL 202
                              ******************************55443333.333....367899********************************** PP

                              HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTT CS
                     EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqee 254
                              +pPWWPtG+elwwg +gl++++g+ppykkph lkkawk+svL+a +khmsp+++++r+l+ qsk+lq+kmsak++ ++++++n+ee
  Itr_sc001866.1_g00009.1 203 APPWWPTGRELWWGDQGLAQQHGPPPYKKPHGLKKAWKISVLAAIVKHMSPDLDRMRRLVKQSKSLQNKMSAKDTTTWSKIVNREE 288
                              ************************************************************************************** PP

                              T-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXX CS
                     EIN3 255 kecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsete 340
                              ++++        l   ++++++ ++ ++++e+++++        +++a+f +++krk   + ++ + ++ v + cq+ q+++s   
  Itr_sc001866.1_g00009.1 289 DLIK--------L--AQKALKIIDQGDQEQEKEEAE--------EEEASFLTHDKRK--CTFEREIATEIVLYACQNLQCPQSGLG 354
                              9883........2..445555555544433322222........2345799999998..4444455556689************** PP

                              XXXXXXXXXXXXX CS
                     EIN3 341 lifadknsisqne 353
                              ++f dk+s++++e
  Itr_sc001866.1_g00009.1 355 FGFLDKTSRTEHE 367
                              **********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.6E-10735288No hitNo description
Gene3DG3DSA:1.10.3180.102.3E-63163294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.88E-56168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MVNFHGELDP LSPGSETETI LEEEEEEMEE IISYRDLKKR MRKDQIHMQK LKDKRAAAAA  60
GKEEILREDD EDESATEKQL EASRRKKTAR SQDAVLKYMV KIMEVCKGQG FVYGIVPENG  120
NPVIGSSDSL REWWKDKVKF VKNAPEAIAE YLPKLVGLVE DPNSSVIYLL QDLQDTTLGS  180
LMSALMPHCL PPQRKFPLEK GLAPPWWPTG RELWWGDQGL AQQHGPPPYK KPHGLKKAWK  240
ISVLAAIVKH MSPDLDRMRR LVKQSKSLQN KMSAKDTTTW SKIVNREEDL IKLAQKALKI  300
IDQGDQEQEK EEAEEEEASF LTHDKRKCTF EREIATEIVL YACQNLQCPQ SGLGFGFLDK  360
TSRTEHEQIC PHRDQNLEFG ENYVPSLITE GDIDTGQLIS LPDGINEDIQ RIFDEYNAQF  420
VNGGAGNYGN LFSDNLTEQQ FSYDPTMAGD EGSTSGSTSV WDLAYDDIDR D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-541652921128Protein ETHYLENE INSENSITIVE 3
4zds_B9e-541652921128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019182837.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A328E5281e-172A0A328E528_9ASTE; Uncharacterized protein
STRINGXP_009792280.11e-162(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-122EIL family protein