 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc001700.1_g00010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
NAC |
| Protein Properties |
Length: 233aa MW: 27151.7 Da PI: 9.1029 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001700.1_g00010.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 48.5 | 2.8e-15 | 8 | 123 | 2 | 106 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWk 84
p G+ F+Ptd el+ yL++ v+gk++ + i e+d+y+ eP+++ k +++ek +y F++ +++++++r r+++ +g+Wk
Itr_sc001700.1_g00010.1 8 PDGYIFRPTDTELL-SYLAQYVTGKSVLSTVPIVEIDLYNGeEPSEIFK--RSREKVMYIFTTLIRRSSSDSRYIRTIRggKGTWK 90
78************.9**********777456******98659****63..4577899******************87766899** PP
NAM 85 atgkdkevlsk.......kgel......vglkktL 106
a+ + k+++++ + + +g k++L
Itr_sc001700.1_g00010.1 91 AQDRGKPIYRRygnddhdD--NqqlrqlIGYKRSL 123
**********976655441..13344557777666 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MERQEHIPDG YIFRPTDTEL LSYLAQYVTG KSVLSTVPIV EIDLYNGEEP SEIFKRSREK 60
VMYIFTTLIR RSSSDSRYIR TIRGGKGTWK AQDRGKPIYR RYGNDDHDDN QQLRQLIGYK 120
RSLSCVEIVS SVWNYSCVEL ILQLKENGSR FIRLCVDHDP HNNDCRFNPS YRLRHRPLND 180
TVLCRIKRKQ NNRDIMGFES GSIEEARNIG DIIGKLRKST TSSEVNSLLE TSH
|
