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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc001687.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
B3 |
Protein Properties |
Length: 239aa MW: 27420.9 Da PI: 9.4535 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc001687.1_g00008.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 35.5 | 1.8e-11 | 21 | 100 | 14 | 99 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
l lp +++ ++kk+ + +l ++ s++vk+ + ++++ +tkGW +Fv +ng+ +Df vF+++g +f++ v +f+
Itr_sc001687.1_g00008.1 21 TSLDLPPIMCKKLNEKKQ--EEAVLIG-QNGSFKVKI--QECKDQgLCFTKGWDDFVGQNGIAFKDFAVFEHMG--SFHFSVVLFD 99
458899999999876644..4788888.55699****..665555599***********************887..6766888777 PP
S CS
B3 99 k 99
+
Itr_sc001687.1_g00008.1 100 Q 100
5 PP
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2 | B3 | 40.9 | 3.6e-13 | 132 | 225 | 3 | 89 |
EE-..-HHHHT....T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE.EEE-TTHHHHHHHHT--TT-EE CS
B3 3 kvltpsdvlks....grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr.yvltkGWkeFvkangLkegDfv 80
++++++++l++ ++ ++pkkf ++++ +s+ +tl+ + g++W kl+ + ks++ + +GWkeF+ +Lk++D++
Itr_sc001687.1_g00008.1 132 TTTIKAYNLRRgvdfNLQYIPKKFSLSNNLL--KSTNITLRGPCGKTWPAKLKSrggKVKSKAyACILDGWKEFAMYYHLKVRDVC 215
5566666666666656679*****9999888..5678***************77565444444645557***************** PP
EEEE-SS.SE CS
B3 81 vFkldgr.se 89
F++++ ++
Itr_sc001687.1_g00008.1 216 SFRFIRLpTS 225
***9875454 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MEHNLPIGWR FFKIMGWGFH TSLDLPPIMC KKLNEKKQEE AVLIGQNGSF KVKIQECKDQ 60 GLCFTKGWDD FVGQNGIAFK DFAVFEHMGS FHFSVVLFDQ TCCQKDLHPN PETCHEGGKN 120 WCTGQENSSC FTTTIKAYNL RRGVDFNLQY IPKKFSLSNN LLKSTNITLR GPCGKTWPAK 180 LKSRGGKVKS KAYACILDGW KEFAMYYHLK VRDVCSFRFI RLPTSYSFMV DVKKILPVN
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