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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc001618.1_g00010.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
B3 |
| Protein Properties |
Length: 235aa MW: 27206.7 Da PI: 9.1613 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001618.1_g00010.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 41.7 | 2e-13 | 11 | 99 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87
ffkv+ + +++ rl lp +++ +++k + +++l+ ++ s++vk+ + ++++ +t+GW eFv+++g+ +Df vFk++g
Itr_sc001618.1_g00010.1 11 FFKVM--KPGFQT-RLKLPPIMCTKLNENK--PEEVVLTG-QNGSFKVKI--QECKDQkLCFTEGWDEFVRQHGIALKDFAVFKHIG- 89
77777..555555.69*******9997665..55788877.5669*****..555555599***********************988. PP
SEE..EEEEE- CS
B3 88 sefelvvkvfr 98
+f+++v +f+
Itr_sc001618.1_g00010.1 90 -SFHFTVILFD 99
.6655776665 PP
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| 2 | B3 | 41.9 | 1.8e-13 | 145 | 228 | 14 | 95 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
+ +p+kf +++++ ++ +tl+ + g+ W k++ + ++ + + +GWkeF+ +Lke+D++ F++++r + +++v
Itr_sc001618.1_g00010.1 145 PYMLIPRKFSRSNNLLMNTILSITLRGPCGKIWPAKFRSygKTYG-GyACILDGWKEFAMHYDLKERDVCSFQFIRRPSYSFMVD 228
4689*********555555568***************55443333.3456667**********************9977767776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MEHNLPIGWH FFKVMKPGFQ TRLKLPPIMC TKLNENKPEE VVLTGQNGSF KVKIQECKDQ 60
KLCFTEGWDE FVRQHGIALK DFAVFKHIGS FHFTVILFDL TCCQKDVHVN PETSNDSGKD 120
LCTGQENSMC FTTTIKAYNV RRRSPYMLIP RKFSRSNNLL MNTILSITLR GPCGKIWPAK 180
FRSYGKTYGG YACILDGWKE FAMHYDLKER DVCSFQFIRR PSYSFMVDVK ILPAC
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