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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc001425.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
GATA |
Protein Properties |
Length: 364aa MW: 39569 Da PI: 6.7897 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc001425.1_g00001.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.1 | 1e-17 | 257 | 291 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
Itr_sc001425.1_g00001.1 257 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 291
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009416 | Biological Process | response to light stimulus |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
METPDFFQPP THYTSQFTPD KRHPSASAAA DCKNNNAADH FVVEDLLDFP NDDTMLADDA 60 ALAAATDSSS ATACNSSSFS AATQFAPDIA ACRNHLADAP FSGEFFVPYE DVAELEWLSN 120 FVEESFSSED LQKLQLISGM KAGNEEESSQ SQTHHFQPEP NPATTFRPEM AAAVPAKARS 180 KRSRAAAPCN WTSRLLVSLS PSVDNAATTT TPAISSSSES DMTTSSSGKK AAPKKKDAAA 240 AAAVAAGMGS NGEGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPAAS 300 PTFVLTKHSN SHRKVLEIRR QKELVQAQQH HHQFLHQKMM FDVSNGDDYL IHHQHIGPHF 360 RHLI
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