 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc001367.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
WOX |
| Protein Properties |
Length: 146aa MW: 16798.7 Da PI: 9.7952 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc001367.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.6 | 1.2e-19 | 10 | 70 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql++L +l+++ r+ps +e++ ++++l +++e++V++WFqN+R +ek+
Itr_sc001367.1_g00001.1 10 TRWNPTQEQLQILRDLYYNngMRNPSPQEIRGITQRLsqygNIEEKNVFYWFQNQRGREKQ 70
8****************97679*************************************97 PP
|
| 2 | Wus_type_Homeobox | 99.3 | 2.8e-32 | 9 | 71 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+tRW+Pt+eQ++iL++ly+ +G+r+P+ +ei+ it++L++yG+ie+kNVfyWFQN++ Re+q+
Itr_sc001367.1_g00001.1 9 STRWNPTQEQLQILRDLYYnNGMRNPSPQEIRGITQRLSQYGNIEEKNVFYWFQNQRGREKQQ 71
79***************9779****************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MDAKYTYVST RWNPTQEQLQ ILRDLYYNNG MRNPSPQEIR GITQRLSQYG NIEEKNVFYW 60
FQNQRGREKQ QTKRPAKLAT DAATPQDLQQ QATAGGSGGR DTKHPMLETL PLFPMHSDRA 120
DKSKADMNSS HQPSLELTLR PYSPTP
|
