 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000950.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
NF-YB |
| Protein Properties |
Length: 183aa MW: 19785 Da PI: 6.1064 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000950.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 105.4 | 3.8e-33 | 29 | 117 | 6 | 94 |
NF-YB 6 rflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91
+ +P++ v +im++++P a+i+++aketvq+cv+efi +vt++a++++++e+rkt++++dl+wa+ lG+ y+e+l+ +++ yr
Itr_sc000950.1_g00001.1 29 NDIPLSTVLKIMREAIPRSARIADEAKETVQKCVTEFIHYVTAKANERAKQERRKTVTTEDLIWAMRALGLGSYAEELTDFITDYR 114
569*********************************************************************************** PP
NF-YB 92 ele 94
++
Itr_sc000950.1_g00001.1 115 ATH 117
875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MNADDNTNAN MNADNAAAAG PQRRSTAQND IPLSTVLKIM REAIPRSARI ADEAKETVQK 60
CVTEFIHYVT AKANERAKQE RRKTVTTEDL IWAMRALGLG SYAEELTDFI TDYRATHVHG 120
RAASHPLPPP PVQQVPFMQG FPVPGFVPGP VNDGAGGSAS SSSPSFGGDY FFDTSYPPTN 180
FNG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5g49_A | 3e-26 | 31 | 114 | 13 | 96 | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 |
