 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000706.1_g00009.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
BES1 |
| Protein Properties |
Length: 328aa MW: 34994.8 Da PI: 8.2257 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000706.1_g00009.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 206.2 | 9.5e-64 | 2 | 145 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86
++++r+ptwkErEnnkrRERrRRaiaaki+aGLR +Gny+lpk++DnneVlkALc+eAGw+ve DGttyrkg++p e+++ g s+
Itr_sc000706.1_g00009.1 2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRLYGNYHLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCRPVESTDFLGGST 87
5899********************************************************************************** PP
DUF822 87 saspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
sas++ss+q +sp++sy++sp+sss+psp+s++ + +as +sl+p+l++ls+ sss+
Itr_sc000706.1_g00009.1 88 SASTCSSYQ--------TSPCTSYNPSPASSSMPSPASSSYVANASVegNSLIPWLRNLSSGSSSA 145
*********........9*******************9999988876789*********9977664 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRLYGNY HLPKHCDNNE VLKALCNEAG 60
WTVELDGTTY RKGCRPVEST DFLGGSTSAS TCSSYQTSPC TSYNPSPASS SMPSPASSSY 120
VANASVEGNS LIPWLRNLSS GSSSASSSKF PHFYLHGGSI SAPVTPPLSS PTGKTPRIRS 180
DWNGPSACVG WGGPHYSFLP SSTPVSPSRQ THPPHSEWLA GIQIPHGGAT SPTYSLVSPN 240
PLGFKAQTLP HHRGSLISTP GQSGTCSPAI AAGFDHTADV PMAEEAVSDE FAFGSNTAGF 300
VKPWEGERIH EDCGPDDLEL TLGSSKTR
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 1e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 1e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 1e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 1e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KP721490 | 1e-67 | KP721490.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES3) mRNA, complete cds. |
