 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000692.1_g00008.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
MYB_related |
| Protein Properties |
Length: 222aa MW: 25266.1 Da PI: 6.8941 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000692.1_g00008.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 53.2 | 7e-17 | 14 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd+ll ++++++G g +W++Ia +++ gRt++++k++w+++l
Itr_sc000692.1_g00008.1 14 KGAWSEEEDDLLRKCIQKFGEGkwhlvpfraglnRWSLIAGRIP-GRTANDVKNYWHSHL 72
79******************************************.************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MVNSSARSSP RVRKGAWSEE EDDLLRKCIQ KFGEGKWHLV PFRAGLNRWS LIAGRIPGRT 60
ANDVKNYWHS HLKKKVVGMH MTTSSNSSRQ DNNWDDEKSK APQITENTLF RPRPRRFFRT 120
SPAFSTLTGK ANAPLPPHQF QASQSEATPP PDLLMLNNVQ QTNNSIATNL PSETTSVQWW 180
EDLLYDDNEH QGTTDMHQGI IDWTDDGFPI DVDLLTLLDP TN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY986895 | 0.0 | AY986895.1 Ipomoea trifida isolate GRIF6200-1 anthocyanin gene transcription factor (myb1) gene, partial cds. |
| GenBank | AY986896 | 0.0 | AY986896.1 Ipomoea trifida isolate GRIF6200-2 anthocyanin gene transcription factor (myb1) gene, partial cds. |
