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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc000661.1_g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
LBD |
Protein Properties |
Length: 245aa MW: 25866.6 Da PI: 7.8788 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000661.1_g00006.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 134.7 | 3.6e-42 | 48 | 147 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe++r+da++slvyeA++r+rdPvyG++g i++lqqq
Itr_sc000661.1_g00006.1 48 PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLMEVPESQRSDAANSLVYEANVRLRDPVYGCMGAISALQQQ 133
7************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
++ l+ael+++++e
Itr_sc000661.1_g00006.1 134 IQFLQAELNAVRAE 147
**********9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MERVDEIIGR KLKTEMEAAS AAASLSSPEM VMAGRRQVLG TTLNTITPCA ACKLLRRRCA 60 EECPFSPYFS PHEPHKFAAV HKVFGASNVS KMLMEVPESQ RSDAANSLVY EANVRLRDPV 120 YGCMGAISAL QQQIQFLQAE LNAVRAELLR HKYREAAAAA AAANSIITSA PALAAGAVSV 180 VELPQAPPTP TPPPPPPPPS VLVVSSSSSS SSTSPPSSAP SSLYTPASTV ASFGTIQTIN 240 MPFFD
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