 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000653.1_g00027.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
WRKY |
| Protein Properties |
Length: 467aa MW: 51099.6 Da PI: 7.4624 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000653.1_g00027.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 107.4 | 7.1e-34 | 198 | 254 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK++kg efprsYY+Ct+++Cpvkkkvers d++++ei+Y+g+Hnh+
Itr_sc000653.1_g00027.1 198 DDGYNWRKYGQKPIKGGEFPRSYYKCTHPNCPVKKKVERSL-DGQITEIIYKGKHNHQ 254
8****************************************.***************8 PP
|
| 2 | WRKY | 108 | 4.7e-34 | 367 | 424 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+vkg++fprsYY+Ct+agC+v+k+ver a+dpk+v++tYeg+Hnh+
Itr_sc000653.1_g00027.1 367 EDGYRWRKYGQKVVKGNPFPRSYYKCTTAGCNVRKHVERLASDPKAVITTYEGKHNHD 424
8********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MAENHAGRAS RSSSSLRLAS ARPSITLPQP SPIFTGGVSP GPMTLVSSLF GENDQDSECR 60
SFSQLLAGAM DSPGARPARR GDPNSKEEEA SFRHNGSAIT QPSIFTIPPG LSPASLLDSP 120
GQGHFGISHQ QALAQLTAQP CIQSDHPSSS LPPAPQFFQL QMPLPGRDHN SIKESSSNVS 180
HSDNVSEPCS FPVDKPADDG YNWRKYGQKP IKGGEFPRSY YKCTHPNCPV KKKVERSLDG 240
QITEIIYKGK HNHQPPQPRK GAKDTGNQNG LQGSSELNLM DGVPFQSLPM KDQESSLATQ 300
EHMSGSSESE KVGDAEARMD RRDDDDDERE SKRRATEGQI PEPVTSHRTV TEPKIVVQTT 360
SEVDLLEDGY RWRKYGQKVV KGNPFPRSYY KCTTAGCNVR KHVERLASDP KAVITTYEGK 420
HNHDVPAARN SSHNTANNAP ALQLRQHNPA AVDNQAALLQ FKEEQIT
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
| UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
