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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000569.1_g00006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | EIL | ||||||||
Protein Properties | Length: 663aa MW: 74350.7 Da PI: 5.0559 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 486.5 | 1.6e-148 | 53 | 427 | 2 | 354 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvega 87 el++rmw+d++ll+rlker+k+ ke + +k++ s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+ga Itr_sc000569.1_g00006.1 53 ELERRMWRDRVLLRRLKERNKS----KEG-DDGAKQRPSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGA 133 9********************8....555.344589************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH- CS EIN3 88 sdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWW 173 sd+LraWWkekv+fdrngpaai+ yqa+n+i+++ +++++ + s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWW Itr_sc000569.1_g00006.1 134 SDNLRAWWKEKVRFDRNGPAAIARYQAENNIPGKIEDSSSVAVSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWW 219 **********************************9999999********************************************* PP --S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S-- CS EIN3 174 PtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecat 259 PtG+e+wwgel+l+kdq +ppykkphdlkkawkv+vLtavikhmsp+i++i +l+rqsk+lqdkm+akes+++l+++nqee+++++ Itr_sc000569.1_g00006.1 220 PTGNEEWWGELSLPKDQVPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKICKLVRQSKCLQDKMTAKESATWLAIINQEEALARK 305 ************************************************************************************** PP XXXXXX.......XXXXXXXXXXXXXXXXXXXX..XXXXXX.XXXXXXXXXX......................XXXXXXXXXXXX CS EIN3 260 vsahss.......slrkqspkvtlsceqkedve..gkkeskikhvqavktta......................gfpvvrkrkkkp 314 ++++s s+ ++ + + + ++++ve ++e++i +v k ++ + ++ krk+ Itr_sc000569.1_g00006.1 306 MYPDSYpnypkcsSSALGNGLYLITDPSDYNVEgvDEEEENI-EVVDYKPRNinclnlvvgapkvqikeeildiTSHFLGKRKQAA 390 ****44457777555559999999*********633333333.4445555558********************99999****9655 PP XXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 315 sesakvsskevsrtcqssqfrgsetelifadknsisqney 354 +e+ + + ++++tc+ ++++s++ ++f+d+ns++++++ Itr_sc000569.1_g00006.1 391 VEDPA--D-KMIYTCEYPKCPYSNYLMGFNDRNSRNNHQI 427 55544..3.367**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.2E-128 | 53 | 300 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.5E-74 | 174 | 309 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 3.92E-61 | 179 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 663 aa Download sequence Send to blast |
MGMFDEMVFC GNLEFQSEPP GIEEMGAEVE AKIAGEGDDD DDGCSDEDVD VHELERRMWR 60 DRVLLRRLKE RNKSKEGDDG AKQRPSQEQA RRKKMSRAQD GILKYMLKMM EVCNAQGFVY 120 GIIPEKGKPV SGASDNLRAW WKEKVRFDRN GPAAIARYQA ENNIPGKIED SSSVAVSTPH 180 TLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVSPPWWP TGNEEWWGEL SLPKDQVPPP 240 YKKPHDLKKA WKVGVLTAVI KHMSPDIAKI CKLVRQSKCL QDKMTAKESA TWLAIINQEE 300 ALARKMYPDS YPNYPKCSSS ALGNGLYLIT DPSDYNVEGV DEEEENIEVV DYKPRNINCL 360 NLVVGAPKVQ IKEEILDITS HFLGKRKQAA VEDPADKMIY TCEYPKCPYS NYLMGFNDRN 420 SRNNHQIICP FRLNSCPNLG TLNYQMNNSK QAVYSSAAPM APKTTGASAI SSSSMDVSSL 480 GLPEDDERAI SELFSFYDNN LQQNGGFNSG NLNGVEDHQN LLQHTAQLQV DDYFSPAGGG 540 MFQPQANTPV THSVLPSTEA QYDQSKPQFE SAFNRNSSDI DDFKFGSSCN LVDYSMDQLP 600 KQDGSTWFIP FLWSIGSDHL VTKYPFNFNF IIIVRFSPYH VTLAGKGLQG GRALLPLELS 660 LQT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-79 | 177 | 310 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-79 | 177 | 310 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019161674.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q9SLH0 | 0.0 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | A0A1I9VYJ5 | 0.0 | A0A1I9VYJ5_IPOBA; EIL1 | ||||
STRING | XP_009759370.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 1e-171 | ETHYLENE-INSENSITIVE3-like 1 |