 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000531.1_g00017.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
SRS |
| Protein Properties |
Length: 353aa MW: 37872.7 Da PI: 8.0204 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000531.1_g00017.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 229.2 | 7.6e-71 | 137 | 286 | 2 | 154 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsals 87
+sg+++CqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqq+la++++++ + a+aa + kr+ ++ s+l
Itr_sc000531.1_g00017.1 137 TSGGVNCQDCGNQAKKDCTHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHLASLQQQNLSLGAAAADNAKRQR--ESPSSLV 220
57899*****************************************************9998877666666666654..7899*** PP
DUF702 88 stklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
+t+l++++s e+ t+ +P+ev+s+avfrcv+vs++dd+ +++aYqtavsigGhvfkGiLydqG+e+
Itr_sc000531.1_g00017.1 221 CTRLPTTSSGLEVGTH-YPAEVNSPAVFRCVKVSAMDDEVDQYAYQTAVSIGGHVFKGILYDQGPEN 286
*******999888776.************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MSGFFSLGGG PGNKDPQVQE QGEDQNLGAT NNNNSSLYLF KNEEIYNKGF ELWQQYYHMH 60
QQRAHHVHHH HPHLVDFSVG VGAAAPPNNP AAAGGGGSSS SSGNLVGDDQ NQSAGAGYSF 120
RSSSSGFRVM RPSSGGTSGG VNCQDCGNQA KKDCTHMRCR TCCKSRGFQC QTHVKSTWVP 180
AAKRRERQQH LASLQQQNLS LGAAAADNAK RQRESPSSLV CTRLPTTSSG LEVGTHYPAE 240
VNSPAVFRCV KVSAMDDEVD QYAYQTAVSI GGHVFKGILY DQGPENRYNS SSVPGESSSA 300
AAQHHQPLNL ISGATASHHQ HQQPGITMLD PSLYPTPLTA IMAGTQFFPP PRP
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
