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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc000503.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
B3 |
Protein Properties |
Length: 272aa MW: 32111.8 Da PI: 10.22 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000503.1_g00001.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 37.7 | 3.6e-12 | 15 | 100 | 9 | 93 |
HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 9 dvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
+v+++ r+ +p kf+++h+++ +s t +l++e+g sW++++ +r + + ++ ++ W++F+k ++L+ gD ++ l+g+s fe
Itr_sc000503.1_g00001.1 15 YVGETrywERIQIPSKFVDTHKNNLGKS-TWVLKTEDGTSWSMEI-IREGTEYFFSRADWEKFAKHHDLRFGDQIMAFLVGNSVFE 98
555555557899*********8775555.9***************.3555555777799**************9998888888885 PP
.E CS
B3 92 lv 93
+
Itr_sc000503.1_g00001.1 99 VM 100
44 PP
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2 | B3 | 42.8 | 9.2e-14 | 190 | 267 | 11 | 94 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
+ + +++p +fa+e g++++ k + l+ e+gr+ ++++ ++ +r+ l+kGWk+F kan++++gD + F+l++ ++ +v
Itr_sc000503.1_g00001.1 190 SHQTFMCVPIDFARETGIIHQ--KRIELRGEKGRRETMQV--ERLHNRVRLSKGWKSFKKANKIRSGDKCSFTLVNPDCL--FV 267
4445689*********99954..57***************..*******************************9875554..55 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MKVNPHGYPS FMKTYVGETR YWERIQIPSK FVDTHKNNLG KSTWVLKTED GTSWSMEIIR 60 EGTEYFFSRA DWEKFAKHHD LRFGDQIMAF LVGNSVFEVM LYNQTTCCQI LNPNPNHTAN 120 EPLEINEASK NGRKHKRKYE FRNKSKSSDI KEEIFDTKNV KQEDGIQINR FSTTNLNAKF 180 PYFETIIKMS HQTFMCVPID FARETGIIHQ KRIELRGEKG RRETMQVERL HNRVRLSKGW 240 KSFKKANKIR SGDKCSFTLV NPDCLFVKKL RH
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