 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000499.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
TALE |
| Protein Properties |
Length: 396aa MW: 44511.6 Da PI: 6.7707 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000499.1_g00002.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.5 | 2.7e-09 | 324 | 358 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++e+ LA+ +gL+++q+ +WF N+R ++
Itr_sc000499.1_g00002.1 324 KWPYPSETEKVALAEATGLDQKQINNWFINQRKRH 358
669*****************************885 PP
|
| 2 | ELK | 35.9 | 1.6e-12 | 278 | 299 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK++Ll+KYsgyL+sLkqE+s
Itr_sc000499.1_g00002.1 278 ELKNHLLKKYSGYLSSLKQELS 299
9*******************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001708 | Biological Process | cell fate specification |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010089 | Biological Process | xylem development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 396 aa
Download sequence Send
to blast |
MENYGQLGEE TAAAAARQRG SGTGFMYGSS VLGPPSYGRT GGESNHVATG FHLQPGGGGE 60
CYGQSDGPPH TTVKSEGGGS SASHHHHHHH QMFQYPLMIR DHLHPRQQES AGDNSLSEGD 120
AMKAKIIAHP QYSNLLEAYV DCQKVGAPPE MAARLSAARQ ELEGKQRASF IGSRDSSKDP 180
ELDQFMEAYY DMLMKYRDEL TRPFQEAMEF MRRIESQLNM LSDGPVRIFN SGGVKGSNAR 240
EHLVDDKCEG VGSSEEDQDN SGGETELREI DPRVQDRELK NHLLKKYSGY LSSLKQELSK 300
KKKKGKLPKD ARQKLLSWWE LHYKWPYPSE TEKVALAEAT GLDQKQINNW FINQRKRHWK 360
PSEDMQFMVM DGLHHQNAAL YMDGHYMGDA PYRLGP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Appears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5'-TGAC-3'. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB283028 | 0.0 | AB283028.1 Ipomoea batatas Ibkn2 mRNA for class-I knotted1-like homeobox protein IBKN2, complete cds. |
