 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000477.1_g00008.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 222aa MW: 25183.4 Da PI: 8.0526 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000477.1_g00008.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.1 | 3e-18 | 80 | 134 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee+F+ + +++ ++ eLA+kl+L rqV vWFqNrRa+ k
Itr_sc000477.1_g00008.1 80 RKKLRLNKEQSALLEECFKHHTTLTMGRKHELATKLNLRPRQVEVWFQNRRARTK 134
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 117.3 | 8.7e-38 | 80 | 170 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86
+kk+rl+keq++lLEe+F+++++L+ rK+ela++L+l+prqv+vWFqnrRARtk+kq+E+d++ Lk+ +++l+ en+rL++e +e
Itr_sc000477.1_g00008.1 80 RKKLRLNKEQSALLEECFKHHTTLTMGRKHELATKLNLRPRQVEVWFQNRRARTKLKQTEVDCNLLKKYCESLSYENCRLKRELQE 165
69************************************************************************************ PP
HD-ZIP_I/II 87 Lreel 91
Lr++
Itr_sc000477.1_g00008.1 166 LRSSF 170
*9865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MAEDDQKLDL RLGLGNCTMP KEDNNSPKKT SGFGVSLDLS FPSHSNDQSG DIIESSKTYE 60
IEGMESQNSY STKSHSGLMR KKLRLNKEQS ALLEECFKHH TTLTMGRKHE LATKLNLRPR 120
QVEVWFQNRR ARTKLKQTEV DCNLLKKYCE SLSYENCRLK RELQELRSSF KFDRPFSDQP 180
PKAKTTATCP SCEKTAGLSG AGSDQKDEAE LVDTVLELKT DP
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 128 | 136 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
