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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000473.1_g00015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | EIL | ||||||||
Protein Properties | Length: 618aa MW: 69787.1 Da PI: 5.7028 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 516.6 | 1.1e-157 | 52 | 430 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 +el++rmw+d+m+lkrlke++++ ++ +++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+g Itr_sc000473.1_g00015.1 52 DELERRMWRDKMKLKRLKEMNRS----NDGNVDTAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSG 133 79********************8....5677999**************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS EIN3 87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172 asd+Lr+WWk+kv+fdrngpaai+kyqa+n+i++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPW Itr_sc000473.1_g00015.1 134 ASDNLREWWKDKVRFDRNGPAAIAKYQAENAIPGRNEGSEP-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPW 218 *************************************9977.99****************************************** PP ---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S- CS EIN3 173 WPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekeca 258 WPtG+e+ww++lgl+k+qg+ppykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l+++nqee++++ Itr_sc000473.1_g00015.1 219 WPTGNEDWWPQLGLQKEQGPPPYKKPHDLKKAWKVGVLTAVIKHMHPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLAR 304 ************************************************************************************** PP -XXXX..XX.XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXX CS EIN3 259 tvsah..ss.slrkqspkvtlsceqkedvegkkeskikhvqavktta..............................gfpvvrkrk 311 +++++ ++ s+ +s +t+s+++++dveg +++ ++q++k + +++++rkrk Itr_sc000473.1_g00015.1 305 ELYPDhcPPlSSAGGSGTFTMSDSTEYDVEGIDDKPNFDIQEQKPSNlsllnlgverfqdglmvqqpphsikddiitNLDFTRKRK 390 *****863357777****************777777799******99****************************99999999998 PP XXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 312 kkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 p+++ + + ++tc+s ++++se +l+f+d++++++++ Itr_sc000473.1_g00015.1 391 --PGNDLPILLDHKIYTCDSLRCPHSEIRLGFPDRSARDNHQ 430 ..7777777777788*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.5E-131 | 52 | 300 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 9.0E-76 | 175 | 310 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.32E-62 | 179 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 618 aa Download sequence Send to blast |
MMMFEEMGFC GDLDFFPAAL KEPADVVAPP PVMEAEAVVV EDDYSDEEIE VDELERRMWR 60 DKMKLKRLKE MNRSNDGNVD TAKQRQSQEQ ARRKKMSRAQ DGILKYMLKM MEVCKAQGFV 120 YGIIPEKGKP VSGASDNLRE WWKDKVRFDR NGPAAIAKYQ AENAIPGRNE GSEPVGPTPH 180 TLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVPPPWWP TGNEDWWPQL GLQKEQGPPP 240 YKKPHDLKKA WKVGVLTAVI KHMHPDIAKI RKLVRQSKCL QDKMTAKESA TWLAIINQEE 300 SLARELYPDH CPPLSSAGGS GTFTMSDSTE YDVEGIDDKP NFDIQEQKPS NLSLLNLGVE 360 RFQDGLMVQQ PPHSIKDDII TNLDFTRKRK PGNDLPILLD HKIYTCDSLR CPHSEIRLGF 420 PDRSARDNHQ LACPFRNSAQ FGVSQFHINE AKPPVFSQQF VQPKTASLPV NSAPLSFDLS 480 GLGVPEDGQR TINDLMSFYE TNIQANKNSC PGNVSATKDH SLQQPSIQCQ QDKYLQNQGV 540 MMEGMIFEDS NISSNRPMVP PGDRFDQCKV LNSPFGSLFN GNSNEAFPFM FGSPFNLQAV 600 DYNEARDAMP KKDAPIWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-84 | 178 | 309 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-84 | 178 | 309 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019199386.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_019199387.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_019199388.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_019199390.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A068VEZ0 | 0.0 | A0A068VEZ0_COFCA; Uncharacterized protein | ||||
STRING | XP_009801714.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |