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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc000461.1_g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
GATA |
Protein Properties |
Length: 367aa MW: 39754.1 Da PI: 6.4283 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000461.1_g00008.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 52.8 | 5.3e-17 | 253 | 287 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C + kTp+WR gp g+ktLCnaCG++y++ +l
Itr_sc000461.1_g00008.1 253 CLHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 287
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MAARGLFIDG SYLLPAGEAE FSSESRYVLE GKAAMENNCN NFPVDDLLNF SVEDEVMADT 60 FFDSVTGDSS TVTGVDSCNS SISGGGGCNF NGNLGCRSFT DAAFPPPSEI CVPYEDLAEL 120 EWLSNIVEDS FSSDELQNLH LISATKTAST AAAASNITDT LSSVTNIAPT GRQSVTEEVS 180 PPAFRSDVSV PGKARSKRSR TAPCDWSSRL LHLSPATSSS DSNCSTAAAI PRAATKTAPC 240 KRRENSETPG RKCLHCASEK TPQWRTGPLG PKTLCNACGV RYKSGRLVAE YRPAASPTFE 300 STRHSNSHRK VLELRRQKDL RRQHHQLQQQ QQSLISQASI FGISNGAEDY LLHHHLESGC 360 PDFRHMI
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 308 | 322 | RKVLELRRQKDLRRQ |