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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Itr_sc000415.1_g00022.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
WOX |
| Protein Properties |
Length: 232aa MW: 26003.6 Da PI: 10.0013 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000415.1_g00022.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 67.4 | 1.8e-21 | 90 | 149 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++
Itr_sc000415.1_g00022.1 90 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLakygKIEGKNVFYWFQNHKARERQ 149
7*****************99**************************************97 PP
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| 2 | Wus_type_Homeobox | 119 | 2.1e-38 | 90 | 151 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L++yGkie+kNVfyWFQN+kaRerqkq
Itr_sc000415.1_g00022.1 90 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLAKYGKIEGKNVFYWFQNHKARERQKQ 151
8***********************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MKVHQFGRSS GLMFDHDNNA APSLSLGCKR LRPLAPKLAA DGGAITISPP VFDLKSFIRP 60
ESNSPTKLGS PDTKKDSPQA AAVETHPGGT RWNPTQEQIG ILEMLYRGGM RTPNAQQIEQ 120
ITAQLAKYGK IEGKNVFYWF QNHKARERQK QKRNTALLAA GLNHSPTTPP PTLPFDPSVV 180
VVGKEEESPK KRRCRSWAYE FLEMEEKRSS CCRREEGDRT LELFPLHPEL GR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Dolzblasz A, et al.
Stem Cell Regulation by Arabidopsis WOX Genes.
Mol Plant, 2016. 9(7): p. 1028-39
[PMID:27109605] - Guo X, et al.
Identification of cyst nematode B-type CLE peptides and modulation of the vascular stem cell pathway for feeding cell formation.
PLoS Pathog., 2017. 13(2): p. e1006142
[PMID:28158306] - Denis E, et al.
WOX14 promotes bioactive gibberellin synthesis and vascular cell differentiation in Arabidopsis.
Plant J., 2017. 90(3): p. 560-572
[PMID:28218997] - Kucukoglu M,Nilsson J,Zheng B,Chaabouni S,Nilsson O
WUSCHEL-RELATED HOMEOBOX4 (WOX4)-like genes regulate cambial cell division activity and secondary growth in Populus trees.
New Phytol., 2017. 215(2): p. 642-657
[PMID:28609015] - Yamaguchi YL, et al.
Root-Knot and Cyst Nematodes Activate Procambium-Associated Genes in Arabidopsis Roots.
Front Plant Sci, 2017. 8: p. 1195
[PMID:28747918]
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