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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000362.1_g00001.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
NF-YA |
| Protein Properties |
Length: 274aa MW: 30213.4 Da PI: 9.3922 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000362.1_g00001.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 94.6 | 1.1e-29 | 143 | 197 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
p++VNaKQy++I++RR+ Rak+e e+kl k rkpylh SRh hA+rRpRg+gGrF
Itr_sc000362.1_g00001.1 143 GPIFVNAKQYHGIMRRRKCRAKAEMENKL--KPRKPYLHLSRHLHAVRRPRGCGGRF 197
69***************************..9************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MSMTMQSVFS KEHEGIGQNP MVPWWSVAQP TAFVETLGHL KDASGNHKQG EGEGALEQSL 60
SKGIPPQFTV FSGNDTKFPQ VQATISVQPT STEYRGSFEL GFGQSVVCAK NPYSEQCYGV 120
YSAYGPQVAG RIMLPLNLSS DEGPIFVNAK QYHGIMRRRK CRAKAEMENK LKPRKPYLHL 180
SRHLHAVRRP RGCGGRFLNT KDVKGATGSK RKGSEVGSMF DREDPEDHRP HPINIHLHSS 240
LQALPDMMNT GHDFLMAGKW GVAAAADSCC NLKV
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