PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000303.1_g00021.1
Organism
Ipomoea trifida
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bZIP
Protein Properties Length: 193aa    MW: 21241.2 Da    PI: 9.8824
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000303.1_g00021.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.5e-0882105326
                              XXCHHHCHHHHHHHHHHHHHHHHH CS
                   bZIP_1   3 elkrerrkqkNReAArrsRqRKka 26 
                              ++++ rr++kNR++A rsR+RK++
  Itr_sc000303.1_g00021.1  82 PDQKRRRLIKNRISAARSRARKQE 105
                              57899******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.00880166IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-1383150No hitNo description
CDDcd147071.41E-1784152No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MNLSSLQNGG PTSVKGFMEP INLSLNLVSD LPCYHNLEPL TQELHNAVFD DVLPTSNIPP  60
PPPPASVTPP ATANGGKSSP PPDQKRRRLI KNRISAARSR ARKQESPTTP FPLLLITFFF  120
CYITSPAYTR ELELEVAQLS KENARLKKQH HEVIRVPTSI LSSPTADDNR LPENATNWPL  180
SPAKGNHGLL SLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18488KRRRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019172278.18e-62PREDICTED: protein FD-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35722239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-10bZIP family protein