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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc000285.1_g00013.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
MYB_related |
Protein Properties |
Length: 340aa MW: 36467.4 Da PI: 9.817 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000285.1_g00013.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 38.4 | 2.9e-12 | 94 | 138 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E+ ++ + ++lG+g+W+ I+rt +Rt+ q+ s+ qky
Itr_sc000285.1_g00013.1 94 SWTEDEHRSFLIGLEKLGKGDWRGISRTYVPTRTPTQVASHAQKY 138
7***************************999*************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MTKETLRKCS HCGHNGHNSR TCKGCSSIRL FGVKINVSGD ENHNDPIRRC KSMGSLQQAL 60 KSANNNGDHG GGGGGGDAGY LSDDSNRTRK KGTSWTEDEH RSFLIGLEKL GKGDWRGISR 120 TYVPTRTPTQ VASHAQKYFI RMSSCDKKKR RSSVFDLGLN DTNQAPPPSS SDKAPPEIPK 180 LASVPPSAPP VTKDESKGKA IETASEKLPI APVDKAFTVM NLGHERPPIS QNTTCEKPPI 240 SPVSPLVPPS FNCMPYMNVP ATQLMPVVSW APVVTYPSYG YLGNSHGNYA APAGCVQYVP 300 PRPVGPLLPR ETHRGGPHGG LVAPATKKDG LDLNMGALKL
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