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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000276.1_g00003.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
bHLH |
| Protein Properties |
Length: 240aa MW: 27323.9 Da PI: 7.0106 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000276.1_g00003.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 45 | 1.9e-14 | 60 | 112 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
++ +hn+ Er RR+riN ++ Lr+llP + + kKls ++ +++ +YI +Lq
Itr_sc000276.1_g00003.1 60 KKLSHNASERDRRKRINALYSSLRSLLPAsD---QTKKLSIPATITRVLKYIPELQ 112
6789*************************55...8888***************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010106 | Biological Process | cellular response to iron ion starvation |
| GO:0055072 | Biological Process | iron ion homeostasis |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MLAFSSPLSF PSSFWPLEES IRHEEFNTDM CRDEMTFLDP NGSCESLKFS ESNGAAMEIK 60
KLSHNASERD RRKRINALYS SLRSLLPASD QTKKLSIPAT ITRVLKYIPE LQKQVERLQQ 120
RKEELGSRIS RQESSSAEFN KRRRVETQSS IGAAVSVTRV GERQVVIHLC TNNGSKVSFA 180
DAISCLEKEG MVLTDSSSFQ TLEHRVFCTF HLQMNGTPGM QVDELREKLL SCFEEKEENF
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