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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000269.1_g00003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 224aa MW: 24795.8 Da PI: 6.396 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 24.3 | 6.8e-08 | 61 | 81 | 31 | 51 |
G2-like 31 tilelmkvkgLtlehvkSHLQ 51 il++m+v+ Lt+ehv+SHLQ Itr_sc000269.1_g00003.1 61 DILKAMNVQKLTREHVASHLQ 81 79******************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.7E-11 | 20 | 83 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.48E-5 | 20 | 84 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MGGRSSNRTT TAAVLKMFII SWTVELHFRL LVAIMFLGDN EEVVVPSKVL EVMMNDERSR 60 DILKAMNVQK LTREHVASHL QGHEEIKRRQ LVKPPPNSSR RLRRRLDVVP LSTTEQDESM 120 VCSTSSSITN TNTNTNNNNN NNNVSMIPSF GDNNVVAAAG NYDTQTMAAS FGHNMISVAA 180 TPPIYNNIGL GNHLTPDFIY NNINQDADAD ADAVPVGRNE GHYD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 7e-08 | response regulator 12 |