 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000215.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
GATA |
| Protein Properties |
Length: 352aa MW: 38625 Da PI: 5.9787 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000215.1_g00002.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 49 | 8.3e-16 | 204 | 240 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgpdg++tLCnaCGl+++ kg+
Itr_sc000215.1_g00002.1 204 CHHCGVSEncTPAMRRGPDGPRTLCNACGLKWANKGT 240
**********************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MAANPRPLQA IPVGDHAPPA VSLDDVDDDN GTYEDDTMDE EEYSRVNSKK HRGGSLTERL 60
KGGVVVASRT SELTLAFEGE VYVFPAVTPE KVQAVLLLLG GPDIPTAVPT VDVPLNSKVE 120
DDTPKHPNLS RRIASLVRFR EKRKERCYDK KIRYTVRKEV AQRMHRKNGQ FASLKGGSGS 180
SSWDPSNCVL EDGTPQSETV PRRCHHCGVS ENCTPAMRRG PDGPRTLCNA CGLKWANKGT 240
LRDLSKGGRI MSLEHRELDT PTDIKPSVLQ NESFPQNQDE LGTPGDHLKT ATLGTQDHSD 300
NHNENLPGNG KDRANKIPDV IVRSPGHIDV QETLVDFGNG SETEIDIPAN FE
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |
