 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000193.1_g00017.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
bZIP |
| Protein Properties |
Length: 341aa MW: 37210.2 Da PI: 6.6848 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000193.1_g00017.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 32.7 | 1.6e-10 | 139 | 195 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l + l++
Itr_sc000193.1_g00017.1 139 KRAKRILANRQSAARSKERKAHYITELERKVQTLQTEATTLSAQLTLFQRDTTGLTN 195
9****************************************9998877666655555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MQDPSGSKPF QTAPFPSAFR QSHHRRAHSE VNFRLPEDLD LASDPFDAAP AGSFESEDDF 60
FSTYMDIEKL GGGGGSGAVD GSAAAESGGN GVKSSSRPRH RHSNSVDSSG LLLGDNGAIE 120
AKKAMAPDKL AELWTIDPKR AKRILANRQS AARSKERKAH YITELERKVQ TLQTEATTLS 180
AQLTLFQRDT TGLTNENTEL KLRLQAMEQQ AQLRDALNEA LKQEVERLRI ATGEMAAPSD 240
AYNLGMQHIP YNQSTLFSSH QPQSGPSEPQ NMQMPQYHPL GPNISTPHHA IFAANHAQAL 300
PHTLHQDPLG RFQGLDINSR GSHLIKTEVP TISASESSST F
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins.
J. Exp. Bot., 2016. 67(19): p. 5699-5710
[PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
Plant Reprod, 2017. 30(1): p. 1-17
[PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
[PMID:9356517]
|
