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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000174.1_g00008.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
bZIP |
| Protein Properties |
Length: 347aa MW: 38023.3 Da PI: 5.964 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000174.1_g00008.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 29.7 | 1.4e-09 | 145 | 193 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
kr++r NR +A rs +RK ++ eLe+kv++L++e ++L +l +
Itr_sc000174.1_g00008.1 145 KRAKRILANRQSAARSKERKARYMSELERKVQTLQTEATTLSAQLTLFQ 193
9****************************************99887665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MQDPSNPKPT ANQTPQFPSA LWPPHHRRAH SEVNFRLPED LDLASDPFDA APAGSFEEIG 60
SEDDLFSTFM DIEKLGAGSM SAAAGMDNAG AGGAADDGGM ASNRPRHRHS NSVDSSSLLL 120
SESAIEAKKA LAPEKLAELW TIDPKRAKRI LANRQSAARS KERKARYMSE LERKVQTLQT 180
EATTLSAQLT LFQRDTTGLS NENTELKLRL QAMEQQAQLR DALNEALKQE VERLKVATGD 240
ITSSSDAYNL GMQHIPYNQS AFFSHQPQPG PRESQNMKMP QFHPLQPCSS APHYPVLLAS 300
QAQGLRDTMQ QQDPLGHFQS LDISSRGSHL MNSEANSIPA TESNIAL
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins.
J. Exp. Bot., 2016. 67(19): p. 5699-5710
[PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
Plant Reprod, 2017. 30(1): p. 1-17
[PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
[PMID:9356517]
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