 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000159.1_g00033.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 212aa MW: 24416.5 Da PI: 9.2224 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000159.1_g00033.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.7 | 4e-18 | 80 | 134 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+k+ ++++eq Lee+F+ + +++ ++ +LA+kl+L rqV vWFqNrRa+ k
Itr_sc000159.1_g00033.1 80 KKKLRLNQEQSALLEECFKHHTTLTMGRKHDLATKLNLRPRQVEVWFQNRRARTK 134
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 115.9 | 2.4e-37 | 80 | 170 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86
+kk+rl++eq++lLEe+F+++++L+ rK++la++L+l+prqv+vWFqnrRARtk+kq+E+d++ Lk+ +++l+ en+rL++e +e
Itr_sc000159.1_g00033.1 80 KKKLRLNQEQSALLEECFKHHTTLTMGRKHDLATKLNLRPRQVEVWFQNRRARTKLKQTEVDCNLLKKYCESLNYENCRLRRELHE 165
59************************************************************************************ PP
HD-ZIP_I/II 87 Lreel 91
Lr++
Itr_sc000159.1_g00033.1 166 LRSSF 170
*9865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MAKEDDQKLD LRLGLGHYSL PKEDNSPKKT SGFGVSLDLS FPSHSNDRSG DIIESSKTFE 60
VYGMESRNSY GTKNNNGVTK KKLRLNQEQS ALLEECFKHH TTLTMGRKHD LATKLNLRPR 120
QVEVWFQNRR ARTKLKQTEV DCNLLKKYCE SLNYENCRLR RELHELRSSF KFDRPPSTSF 180
SDQPPKAKTT ATCPSCEKNE TELVDTVLEL KN
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 78 | 84 | TKKKLRL |
| 2 | 128 | 136 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
