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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000124.1_g00013.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
bZIP |
| Protein Properties |
Length: 370aa MW: 40472.3 Da PI: 6.5962 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000124.1_g00013.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 30.1 | 1e-09 | 142 | 190 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l +
Itr_sc000124.1_g00013.1 142 KRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQ 190
9****************************************99887665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MQDPANSKPM MMSQAPAFPS ALRPSHHRRA HSEVNFRLPE DLDLVSDPFD AAPAGSFEEM 60
GSEDDLFSTY MDIEKLGGAG AGPDSVAADS GGDGEKSLGR PRHRYSNSVD SSSSLLLSES 120
TIEAKKAMAP DKLAELWTID PKRAKRILAN RQSAARSKER KARYISELER KVQTLQTEAT 180
TLSAQLTLFQ RDTTGLSNEN TELKLRLQAM EQQAQLRDAL NEALKNEVER LRIATGEIAA 240
PSDAYSLGMQ HIPYNQSAFF SHQPPSGPSD SQNIQIPQFH AIQPSTSTPH HPMLASASVQ 300
ALADTVQQDP LGRFQGLDIS SSRGSHIVKS EAPSISASES SSRKRSRLLG LIPTLHVLEL 360
MRGYWQFLGA
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins.
J. Exp. Bot., 2016. 67(19): p. 5699-5710
[PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
Plant Reprod, 2017. 30(1): p. 1-17
[PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
[PMID:9356517]
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