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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000115.1_g00021.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
MYB_related |
| Protein Properties |
Length: 350aa MW: 38527.4 Da PI: 5.7986 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000115.1_g00021.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 41 | 4.4e-13 | 78 | 120 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
++++++E+el++++++ G++ W+ Ia+ ++ gRt++++k+ w++
Itr_sc000115.1_g00021.1 78 NNFSPQEEELIIKLHATIGSR-WTIIAQQLP-GRTDNDVKNLWNT 120
589******************.*********.**********997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MGRPHGSCTE KLPSRRGFWD DEYDHDVSRT KTGNWAAISK KTPGMGGRVE RSSRARWSNN 60
RSSRHDVDHH HHQQQDNNNF SPQEEELIIK LHATIGSRWT IIAQQLPGRT DNDVKNLWNT 120
KLKKKLSAMG IDPVTHKPFS QILADYGNIG GFPTAGTSSR PQFGTLNRAL KTTIILSKSQ 180
KSSASAADCC GFLQSNKSSD DSNQYMDLLS ELQAIKSITE STNYSSAAPD AINIVSPPSS 240
LSSSSSLTSP PLAAQEKTCT GFSWCDFLLE DAFLPLNVQQ AASEDWEPKN PVDHNTSPED 300
IIKISSSSSS SNNNLEAAAS SSSFVEAMLS REDDDMFLDF PGLSEEPFYY
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1a5j_A | 9e-14 | 16 | 126 | 7 | 108 | B-MYB |
