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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc000085.1_g00011.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
NF-YB |
Protein Properties |
Length: 176aa MW: 19937.2 Da PI: 5.1373 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000085.1_g00011.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 165 | 1e-51 | 22 | 118 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
+reqdr+lPianv+rimk++lPanakisk+aket+qecvsefi+fvt+eas+kc+rekrkt+ngdd++wal++lGf+dy+ pl++y
Itr_sc000085.1_g00011.1 22 MREQDRLLPIANVGRIMKQILPANAKISKEAKETMQECVSEFIGFVTGEASEKCRREKRKTLNGDDVCWALGSLGFDDYAPPLRTY 107
59************************************************************************************ PP
NF-YB 87 lkkyrelegek 97
l++yr l+ e+
Itr_sc000085.1_g00011.1 108 LHRYRRLQVER 118
*****988765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MDDNREGQNY SFSPGDDDGV LMREQDRLLP IANVGRIMKQ ILPANAKISK EAKETMQECV 60 SEFIGFVTGE ASEKCRREKR KTLNGDDVCW ALGSLGFDDY APPLRTYLHR YRRLQVERER 120 AEELKAAGNN GEMKALAEEP AADDDNYLKG EPAIIRYSSS ATTSVCHNSF QFHQFH
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Functional Description ? help
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Source |
Description |
UniProt | Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. |