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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc000068.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
YABBY |
Protein Properties |
Length: 150aa MW: 17149.2 Da PI: 10.4487 |
Description |
YABBY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000068.1_g00001.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | YABBY | 134.1 | 1.7e-41 | 36 | 121 | 83 | 170 |
YABBY 83 ksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168
++ + ++++ s+ + +++ + +++ ++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihf
Itr_sc000068.1_g00001.1 36 RMDYGSSSKYSNRMGMTMRPPITNR--TEERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 119
2222222222222222222222222..222358***************************************************** PP
YABBY 169 gl 170
gl
Itr_sc000068.1_g00001.1 120 GL 121
97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MAAAFQSLSS SSSSPSHWQD HHLHHQVPSY TSPEYRMDYG SSSKYSNRMG MTMRPPITNR 60 TEERIVNRPP EKRQRVPSAY NQFIKEEIQR IKANNPDISH REAFSTAAKN WAHFPHIHFG 120 LMLESNNQPK IGAAEGTGKH MTHRAALLNK
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Functional Description ? help
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Source |
Description |
UniProt | Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development. {ECO:0000269|PubMed:19837869}. |