 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000049.1_g00027.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
LBD |
| Protein Properties |
Length: 225aa MW: 25443.1 Da PI: 8.694 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000049.1_g00027.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 109.6 | 2.4e-34 | 9 | 102 | 1 | 94 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
aCa+Ck++r+kC+++Cvlap fpae+ ++f++vhk+FG+snv+k++++l+eeer +a++slv+eA +r++dPv G +g ++++ ++
Itr_sc000049.1_g00027.1 9 ACASCKHQRKKCTEKCVLAPFFPAEKGREFQAVHKVFGVSNVTKMVRNLKEEERGRAVESLVWEAICRQNDPVLGPFGEYRRVYEE 94
7************************************************************************************9 PP
DUF260 87 leqlkael 94
l+ k++
Itr_sc000049.1_g00027.1 95 LKLYKSQY 102
99998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MQRSNGTTAC ASCKHQRKKC TEKCVLAPFF PAEKGREFQA VHKVFGVSNV TKMVRNLKEE 60
ERGRAVESLV WEAICRQNDP VLGPFGEYRR VYEELKLYKS QYEPTGMVIG WNNAAPAANN 120
NDGRTTTNNN NNIVHNNNDN NNNNNNSLNY IHSNGNNSVV GYNNYPINHP QNFEKLRRES 180
DNGSTVILPA RQHPINGFNQ QYFIAGQYNP ADTKSMESSL WDGVS
|
