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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000047.1_g00036.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
C2H2 |
| Protein Properties |
Length: 210aa MW: 21913.3 Da PI: 3.8826 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000047.1_g00036.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.3 | 0.0005 | 110 | 132 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C++Cg ++++ + H+r+H
Itr_sc000047.1_g00036.1 110 FACEICGARYPTEKAMFGHLRSH 132
78*******************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MASGKETTVA SSSMGEGSGG SQKAAEGVTV AVAPPPSSSL PVPQPAPVED RDSPVPVPPM 60
ENVMEGDAPP LPLEPVAVEE GGDVVAAGEI APAGQAAGEI APAGQAAGDF ACEICGARYP 120
TEKAMFGHLR SHKDRGWRGA FSPPTFSIEE FAEYQEHLVK PEEEQLREIE AEERAAAGER 180
VVLDVDLNVE VAPVEEFILP DLNLPPPDED
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