 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000044.1_g00042.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
NF-YB |
| Protein Properties |
Length: 254aa MW: 27955.7 Da PI: 4.1086 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000044.1_g00042.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 41.7 | 2.7e-13 | 19 | 112 | 8 | 96 |
NF-YB 8 lPianvsrimkkvlPanak...is..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88
lP + v r++k l + +k +s ++a + e + fi ++++ a+d c + kr+t+n++d++ al ++ f ++ +pl++ l+
Itr_sc000044.1_g00042.1 19 LPKTIVRRLVKDKLSQLSKdgeMSllREAHQAFSESARIFIHYLSAAANDVCMESKRQTMNAEDVFKALDEIEFSEFTDPLRASLE 104
78888899999887765552223333799********************************************************* PP
NF-YB 89 kyrelege 96
++r+ +++
Itr_sc000044.1_g00042.1 105 EFRQKHSK 112
***97765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MADEKEKGAA MPEVEVEDLP KTIVRRLVKD KLSQLSKDGE MSLLREAHQA FSESARIFIH 60
YLSAAANDVC MESKRQTMNA EDVFKALDEI EFSEFTDPLR ASLEEFRQKH SKRKAAASKS 120
VESNKKAKNE ETPAENGTSK KKQESTDNKK GKNTKPAVKE NGARKAQPVE SEEKDGEETN 180
ESEEDDVQEG NESGAEDGQE GNGSESEDEQ EGNGSEAENG QEENGSEAEV GIEGKDSEEE 240
DGQEDDESED TADD
|
