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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Itr_sc000042.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
| Family |
bHLH |
| Protein Properties |
Length: 266aa MW: 30890.1 Da PI: 8.4666 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000042.1_g00004.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 37.5 | 4.2e-12 | 83 | 135 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
rr+ h +E+rRR+++ + +e Lr+llP ++K s ++ + v YIk+L+
Itr_sc000042.1_g00004.1 83 RRALHRDVEKRRRNQMANLYESLRSLLPLqY---IKGKRSASDHMQASVSYIKDLE 135
7999*************************66...*******************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MDNLWEIFPS IDYYNYLDDH PQLLHQIPSQ QPNGILSSQQ NYTMEDPTSW INPNNNDCGE 60
SFKKKRKRRE MKLQRGDDDD SCRRALHRDV EKRRRNQMAN LYESLRSLLP LQYIKGKRSA 120
SDHMQASVSY IKDLEKKVEG LHKHREKMMK MKNTSSSNMV VMEKSVEKEA KGAKWCCAND 180
ISVAVNKCED GIEILMNTRH RRDGVEYPLS ELLATLLRQG LNVVNCCYSH QEDRSLLRIQ 240
AQVNGWSDVD VAALQQKVVD VVIKPH
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 62 | 68 | KKKRKRR |
| 2 | 63 | 68 | KKRKRR |
