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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Itr_sc000040.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
GATA |
Protein Properties |
Length: 325aa MW: 34945.4 Da PI: 6.5092 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000040.1_g00005.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.2 | 9.6e-18 | 239 | 272 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
Itr_sc000040.1_g00005.1 239 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 272
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MDSNFVDEID CGSFFDHIDD LIDFPPENEC AGVGSGDCAN FPSIWDEPLP DSDPIFSAAH 60 SHSASDLSAE LSVPYEDIVQ LEWLSAFVEE SFSDGGLTLG KENYPIIPKP ESDKKFQAAS 120 SPISVLESST SSSSSSNSSC SGGSGGKVMP LSPSQRGAQR ARSKRPRPVA FNPRPVMQLI 180 ETPQPESFAD SPVKKVPRPP PAGAPEQKKK KKIKFSMPAL PNPGGPDQDQ TGAQPVRKCM 240 HCEITKTPQW RAGPMGPKTL CNACGVRYKS GRLFPEYRPA ASPTFVPALH SNSHKKVVEM 300 RTKAVEQSPV SSLVAPTVTA PPEIK
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