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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Itr_sc000039.1_g00015.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family |
ARR-B |
Protein Properties |
Length: 580aa MW: 64883.8 Da PI: 6.6741 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Itr_sc000039.1_g00015.1 | genome | Kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 78 | 1.2e-24 | 228 | 281 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++Wt +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl
Itr_sc000039.1_g00015.1 228 KPRVVWTVDLHQKFVKAVNHI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 281
79*******************.9*******************************8 PP
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2 | Response_reg | 57.6 | 6.9e-20 | 76 | 162 | 24 | 109 |
EEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
Response_reg 24 eevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
+v+++ ++ea+ ll+e++ +D+++ D++mp+mdG++ll+ e++lp+i+++ ge + + + ++ Ga d+l Kp+ ++el
Itr_sc000039.1_g00015.1 76 LKVTTCGLATEAISLLRERRngFDIVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEL 160
48999999********999999*******************87754.558***********************************9 PP
HH CS
Response_reg 108 vk 109
++
Itr_sc000039.1_g00015.1 161 RN 162
87 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0009735 | Biological Process | response to cytokinin |
GO:0010082 | Biological Process | regulation of root meristem growth |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 580 aa
Download sequence Send
to blast |
MESVMAGGIF LPRTETFPAG LRVLVVDDDP TWLKILEKML KKCSYEVTRE TYRHYYTQGC 60 ALGKPRLVTF AAKGPLKVTT CGLATEAISL LRERRNGFDI VISDVNMPDM DGFKLLELVG 120 LEMDLPVIMM SVDGETSRVM KGVQHGACDY LLKPIRMKEL RNIWQHVVRK RMQESRDIEN 180 HEGDQFDEAW MFNGIELQSG KKRKDFDYKF DERETSDSKS GDPSSVKKPR VVWTVDLHQK 240 FVKAVNHIGF DKVGPKKILD LMGVPWLTRE NVASHLQKYR LYLTRLQKEN ELKASSSGTK 300 HPDLSPKESS SSACLQNLVD VKPSKSTNGK YAFHGEKFCV QEVESRNYEG EVKAAASLST 360 AGVSRALVGE NCDSQKSISC SKASWASEVS KTGFKHEFKP QIQTEDNVNH LPSPKLPRNV 420 HLDQAQPLLN LAPHKDINPG EIKSKPGNIN TENPGVRTVS PLECAVDLLP AQPSQPQSCL 480 TNFQAFEQIP STTWSTKTPQ ILINGLESVE GNLFLGGGSW DKDFNAAALQ GEFHSPCVVG 540 PQSLELLDYS NTNLTGEIQP YFYDYEYAID PVIDHGLFIL
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |