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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000034.1_g00044.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
LBD |
| Protein Properties |
Length: 210aa MW: 23811.8 Da PI: 4.0373 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000034.1_g00044.1 | genome | Kazusa | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 116.4 | 1.7e-36 | 7 | 105 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq 85
+C aCk+lrr+C+++Cv+apyf +q +++fa+vhk+FGasnv+kll +lp + r++a+ ++ yeA ar++dP+yG+v+ i++l+q
Itr_sc000034.1_g00044.1 7 SCGACKFLRRRCSNECVFAPYFFYDQaASHFAAVHKVFGASNVSKLLLHLPVDSRSEAAITISYEAMARMQDPIYGCVAQIFALEQ 92
6*********************999978********************************************************** PP
DUF260 86 qleqlkaelallk 98
++++l +e++ ++
Itr_sc000034.1_g00044.1 93 EVASLMEEIENIE 105
*******998765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MTGLGSSCGA CKFLRRRCSN ECVFAPYFFY DQAASHFAAV HKVFGASNVS KLLLHLPVDS 60
RSEAAITISY EAMARMQDPI YGCVAQIFAL EQEVASLMEE IENIEKLMAY CACEGPEQQC 120
MVNDELLFFS EYNNMSINMN HNVTVPFLED SYANSTPYSQ MNMQNPPVNG WEDEIFFPFS 180
DSDISDIFNE TIDPNIYLQY QLVDNGNIYH
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