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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Itr_sc000031.1_g00032.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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| Family |
NF-YA |
| Protein Properties |
Length: 276aa MW: 30456.6 Da PI: 7.7425 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Itr_sc000031.1_g00032.1 | genome | Kazusa | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 98.6 | 6.4e-31 | 161 | 217 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++Il+RRq Rak+e e+k+ k+rkpylheSRh hA+rR+R gGrF
Itr_sc000031.1_g00032.1 161 EEPVYVNAKQYHGILRRRQLRAKAELENKV-VKNRKPYLHESRHLHAMRRARDGGGRF 217
69****************************.**************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MASDAMSSGA TPASSCTIGS LAWCQAMVSR NAWNNTYENS SASPSVGPGN ETSAHMLWED 60
NGGMHHTATD PKGFRELHTS DKNCKVESEN VARAMSPTTR DHHYSRPATE HDLMGHSIQC 120
ASYPYTEPAA FLGAAGESVV HQTAQGGHHG RMVLPLEVTT EEPVYVNAKQ YHGILRRRQL 180
RAKAELENKV VKNRKPYLHE SRHLHAMRRA RDGGGRFVNT KKSDSTSNTT PCSSNSSEAN 240
KYSDSHGSEA SGMQGADQYV QWGYEYQHFK VMKDWV
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