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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
IGS.gm_17_00084 |
| Common Name | CHLNCDRAFT_136680 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
|
| Family |
SBP |
| Protein Properties |
Length: 304aa MW: 32376.4 Da PI: 6.4496 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| IGS.gm_17_00084 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 104.2 | 9.6e-33 | 93 | 168 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77
CqvegC + l+ +keyh+r+kvCe h k+p ++ +g++ rfCq C+rf l++fD++krsCr +L++hn+rrrk+
IGS.gm_17_00084 93 CQVEGCGMSLEALKEYHQRYKVCEEHLKTPYIIRDGQQVRFCQHCGRFQPLEDFDDNKRSCRVHLQRHNARRRKRP 168
*************************************************************************975 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048653 | Biological Process | anther development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MEAHGEAYVN GTVEEQAAPQ ALQELQAAVQ DVHAMPVVVG AYQDALAEQA AAGTPADHGM 60
GDDTPGMHLG GMSGRGGRMS SGSFKNRTGP LYCQVEGCGM SLEALKEYHQ RYKVCEEHLK 120
TPYIIRDGQQ VRFCQHCGRF QPLEDFDDNK RSCRVHLQRH NARRRKRPRD GSAGGGDMGD 180
YVHHHATSAA AAAEMAKLAS SYAPAAIPIS PKEIQAMQEA LHFASTTLQH SSQVVTGKPA 240
GEEGGEGGGA VAMGPGSMPF VPAPDVMMLL LKGYAAMFHY TLDAATLRGL APPSDLPEQQ 300
LLQ*
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