PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han008672 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bZIP | ||||||||
Protein Properties | Length: 186aa MW: 20889.3 Da PI: 8.4984 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 41 | 85 | 2 | 46 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 ++ k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Han008672 41 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQ 85 567899*************************98888887776554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.5E-9 | 37 | 87 | No hit | No description |
SMART | SM00338 | 6.1E-8 | 40 | 103 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.461 | 42 | 86 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-7 | 42 | 85 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.62E-7 | 44 | 87 | No hit | No description |
CDD | cd14708 | 4.36E-23 | 44 | 96 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 47 | 62 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.0E-21 | 127 | 186 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MAELSPRTDT STDGDTEDKA MGFHSSHSHG PVVSDASDKS RDQKTLRRLA QNREAARKSR 60 LRKKAYVQQL ESSRMKLTQL EQELQRARQQ GIFISSSGEQ SQSMSGNGAL AFDVEYGRWL 120 EDHNRRINEL KGAVSNHAGD GELRIIVDSV VAHYEDIFRI KADAAKADVF HVLSGMWKTP 180 AERCFL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021970810.1 | 1e-136 | transcription factor TGA2.3-like | ||||
Swissprot | P23923 | 3e-95 | HBP1B_WHEAT; Transcription factor HBP-1b(c38) | ||||
TrEMBL | A0A251UK56 | 1e-134 | A0A251UK56_HELAN; Putative basic-leucine zipper domain, Transcription factor TGA like domain protein | ||||
STRING | Migut.F00128.1.p | 1e-114 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-72 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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