PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Han008664
Organism
Helianthus annuus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
Family bZIP
Protein Properties Length: 265aa    MW: 29584.6 Da    PI: 10.0176
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Han#S48340825PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10102138339
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                e k +rr+++NReAAr+sR+RKka++++Le+   +L+
  Han008664 102 EQKTQRRLAQNREAARKSRLRKKAYVQQLENSRLKLT 138
                6799**************************8554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.5E-995149No hitNo description
SMARTSM003386.1E-4100153IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186102146IPR004827Basic-leucine zipper domain
PfamPF001709.4E-8102139IPR004827Basic-leucine zipper domain
CDDcd147081.66E-21104155No hitNo description
SuperFamilySSF579593.69E-7104144No hitNo description
PROSITE patternPS000360107122IPR004827Basic-leucine zipper domain
PfamPF141444.0E-20186251IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MGSKSFKVAG KVYTSVADSM PSFIANSNGA EGNTGQSSRV SNVGPHEQSI GFRGGAYNST  60
SLINQTIHPD LQFSSYEKFD VDPSNPFMAS GSNDKQKDKF PEQKTQRRLA QNREAARKSR  120
LRKKAYVQQL ENSRLKLTQL EQEVQRARKQ GVVISNTGDQ SQPNSGNGSL AFVAEYSRWL  180
EEXSXHTSEL RAAVTSHXSD SELRSLVENA TTHFNDIFRL KKIAAKADVF HXIYGMWTSP  240
AEXVFLWDRG FVHLTTQASV SHLDR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021999860.11e-179transcription factor HBP-1b(c38)-like isoform X4
SwissprotO241605e-74TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A251SPI81e-147A0A251SPI8_HELAN; Putative basic-leucine zipper domain, Transcription factor TGA like domain protein
STRINGVIT_08s0007g05170.t014e-85(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.32e-73TGACG motif-binding factor 6