PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Han007127 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Heliantheae alliance; Heliantheae; Helianthus
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Family | bZIP | ||||||||
Protein Properties | Length: 214aa MW: 23204.1 Da PI: 6.14 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.8 | 3.6e-11 | 156 | 204 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i +Le+kv++L++e ++L +l + Han007127 156 KRAKRILANRQSAARSKERKARYISNLERKVQTLQTESTTLSAQLALXQ 204 9****************************************98887655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-9 | 152 | 213 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.427 | 154 | 214 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.5E-10 | 156 | 202 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.03E-11 | 156 | 210 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-10 | 156 | 210 | No hit | No description |
CDD | cd14703 | 1.93E-22 | 157 | 208 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MQDPSNLNSK PSNTTPFPFK PSHHRRAQSE VNFRLPEDLD LASDPLDAPS GSFEDIGSEE 60 DLFSTYMNIE KIGSIVNHAN GVVDGGRISN AVGEGGGSDD NYGGGGGVVD GEKISTKPRH 120 RYSNSVDSSS CFGEIIEAKK AMAPDKLAEL WTVDPKRAKR ILANRQSAAR SKERKARYIS 180 NLERKVQTLQ TESTTLSAQL ALXQRDTAGL SSEX |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Strongly expressed in mature pollen. {ECO:0000269|PubMed:27896439}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021977191.1 | 1e-154 | transcription factor RF2b-like | ||||
Refseq | XP_021977192.1 | 1e-154 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 3e-68 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A251U4N6 | 1e-152 | A0A251U4N6_HELAN; Putative basic-leucine zipper domain-containing protein | ||||
STRING | PGSC0003DMT400042946 | 1e-82 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 2e-60 | bZIP family protein |
Publications ? help Back to Top | |||
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