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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G045358.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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| Family |
LBD |
| Protein Properties |
Length: 233aa MW: 25080.2 Da PI: 5.6514 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G045358.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 134.9 | 3e-42 | 48 | 147 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+ +
HL.SW.v1.0.G045358.1 48 PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEAGARIRDPVYGCAGAICQLQKQVGE 136
7**************************************************************************************** PP
DUF260 90 lkaelallkee 100
l+a+la++++e
HL.SW.v1.0.G045358.1 137 LQAQLAKAQAE 147
******99976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MECSTETNTT TTASSSPPLA SQYSSNSSSS SPPQTPNPSP NPPVVLSPCA ACKILRRRCA 60
DKCVLAPYFP PTEPAKFTIA HRVFGASNII KFLQELPESQ RADAVSSMVY EAGARIRDPV 120
YGCAGAICQL QKQVGELQAQ LAKAQAEVVN MQCQQANLVA LLCMEMAQSQ QGYNNNNNSP 180
PHHQQISLDG SLMINNITST TTPLMISNQS NNSLSFLDDN NNLGSMWEPL WT*
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