 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
HL.SW.v1.0.G044429.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
|
| Family |
WRKY |
| Protein Properties |
Length: 414aa MW: 45329.9 Da PI: 8.9899 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| HL.SW.v1.0.G044429.1 | genome | HOPBASE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 77.9 | 1.2e-24 | 95 | 151 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e++++ ++v+e++Y+++H+h+
HL.SW.v1.0.G044429.1 95 SDGYNWRKYGQKQVKSPQGSRSYYKCTYSECCAKK-IECCDHSGHVTEVVYKSQHTHD 151
7********************************98.*********************7 PP
|
| 2 | WRKY | 96.5 | 1.8e-30 | 275 | 332 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++++itY+g H+h+
HL.SW.v1.0.G044429.1 275 ADGHRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTNAIIITYKGVHDHD 332
6********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 414 aa
Download sequence Send
to blast |
GQIDNTRNEV VTGTMVQCLD APKEKQHQSN ACRTLSELSP TSVTQSISSA PSPILLEQRL 60
SPPKDNDLCT PVPKKRNSSD LKIVSSVPAV KIPASDGYNW RKYGQKQVKS PQGSRSYYKC 120
TYSECCAKKI ECCDHSGHVT EVVYKSQHTH DPPKKSNNTR ENKLTSAERF PGYNVAKQPC 180
KVPKDSEPST SAKESTHETP PCSERKRENL VNTDENGDPK VKEELDNEPE QKKRQVSSEV 240
VSSIKSNVEY AGSILKSSKK PKFVVHAAGD VGISADGHRW RKYGQKMVKG NPHPRNYYRC 300
TSAGCPVRKH IETAVDNTNA IIITYKGVHD HDMPVPKKRH GPPSAPLVAA AAPASMNSLQ 360
LKKSDATPNQ VSSTQWSVDN EGELTGEALD LGGEKAMESA RTLLSIGFEI KPC*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
